7E1K
Crystal structure of Pr55Gag-matrix domain in complex with IP6 in space group R32
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-02 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.10 |
Spacegroup name | H 3 2 |
Unit cell lengths | 97.828, 97.828, 176.297 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.100 - 2.400 |
R-factor | 0.2233 |
Rwork | 0.220 |
R-free | 0.27590 |
Structure solution method | FOURIER SYNTHESIS |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.31) |
Phasing software | PHENIX |
Refinement software | PHENIX (DEV-3318) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.910 | 48.910 | 2.490 |
High resolution limit [Å] | 2.400 | 8.980 | 2.400 |
Rmerge | 0.217 | 0.042 | 1.707 |
Rmeas | 0.222 | 0.044 | 1.749 |
Rpim | 0.049 | 0.010 | 0.379 |
Total number of observations | 263912 | 4963 | 28133 |
Number of reflections | 12979 | 280 | 1329 |
<I/σ(I)> | 12 | 40.9 | 2.2 |
Completeness [%] | 99.9 | 98.9 | 100 |
Redundancy | 20.3 | 17.7 | 21.2 |
CC(1/2) | 0.998 | 1.000 | 0.860 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277 | PEG 3350 and 100 mM MES |