Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7E1B

Crystal structure of VbrR-DNA complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2019-04-11
DetectorADSC QUANTUM 315r
Wavelength(s)0.97818
Spacegroup nameC 1 2 1
Unit cell lengths329.942, 114.064, 114.036
Unit cell angles90.00, 110.02, 90.00
Refinement procedure
Resolution46.006 - 4.587
R-factor0.2766
Rwork0.265
R-free0.32060
Structure solution methodSAD
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0004.760
High resolution limit [Å]4.5879.8904.600
Rmerge0.0650.0261.024
Rmeas0.0780.0321.250
Rpim0.0420.0170.708
Number of reflections1599523701677
<I/σ(I)>7.2
Completeness [%]93.798.472.7
Redundancy3.23.12.8
CC(1/2)0.9980.534
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2 M NaCl, 0.1 M MES pH 6.6, and 20% PEG4000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon