7DZ2
Crystal structures of D-allulose 3-epimerase from Sinorhizobium fredii
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE AR-NE3A |
| Synchrotron site | Photon Factory |
| Beamline | AR-NE3A |
| Temperature [K] | 95 |
| Detector technology | PIXEL |
| Collection date | 2019-12-07 |
| Detector | DECTRIS PILATUS 2M-F |
| Wavelength(s) | 1.0000 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 62.973, 88.297, 128.695 |
| Unit cell angles | 90.00, 99.29, 90.00 |
Refinement procedure
| Resolution | 32.650 - 1.550 |
| R-factor | 0.1702 |
| Rwork | 0.169 |
| R-free | 0.18770 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5zfs |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.857 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 45.170 | 1.580 |
| High resolution limit [Å] | 1.550 | 1.550 |
| Rmeas | 0.062 | 0.062 |
| Rpim | 0.023 | 0.428 |
| Number of reflections | 195342 | 9475 |
| <I/σ(I)> | 17.6 | 2 |
| Completeness [%] | 97.2 | |
| Redundancy | 6.9 | |
| CC(1/2) | 0.999 | 0.743 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M Lithium sulfate monohydrate, 0.1 M BIS-TRIS pH 6.5, 25% w/v PEG 3,350 |






