7DVK
PyrI4 in complex with intermolecular Diels-Alder product
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-11-29 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 1.5418 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 102.959, 102.959, 168.798 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.022 - 2.600 |
R-factor | 0.2114 |
Rwork | 0.208 |
R-free | 0.27160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5btu |
RMSD bond length | 0.008 |
RMSD bond angle | 1.622 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.090 | 46.040 | 2.720 |
High resolution limit [Å] | 2.600 | 9.010 | 2.600 |
Rmerge | 0.085 | 0.033 | 0.356 |
Rmeas | 0.090 | 0.035 | 0.375 |
Rpim | 0.028 | 0.011 | 0.115 |
Total number of observations | 7200 | 34865 | |
Number of reflections | 28638 | 805 | 3401 |
<I/σ(I)> | 20.6 | 42.3 | 6.1 |
Completeness [%] | 99.8 | 99.1 | 98.7 |
Redundancy | 10.1 | 8.9 | 10.3 |
CC(1/2) | 0.999 | 0.999 | 0.961 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 6% Polypropylene glycol P400, 2% glycerol |