7DVA
Structure of wild type Bt4394, a GH20 family sulfoglycosidase, in complex with 6S-GlcNAc
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17U1 |
| Synchrotron site | SSRF |
| Beamline | BL17U1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2019-04-28 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.979191 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 49.500, 125.596, 84.640 |
| Unit cell angles | 90.00, 90.63, 90.00 |
Refinement procedure
| Resolution | 50.483 - 1.550 |
| Rwork | 0.142 |
| R-free | 0.18440 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3rcn |
| RMSD bond length | 0.005 |
| RMSD bond angle | 1.217 |
| Data reduction software | XDS |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 70.190 | 1.580 |
| High resolution limit [Å] | 1.550 | 1.550 |
| Rmerge | 0.097 | 1.005 |
| Number of reflections | 145268 | 7086 |
| <I/σ(I)> | 11.5 | 2 |
| Completeness [%] | 97.4 | |
| Redundancy | 6.8 | |
| CC(1/2) | 0.996 | 0.584 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 282 | 10 mM of 4MU-6S-GlcNAc with 10 mg/mL protein in the buffer of 25 mM PH 8.0, =300 mM NaCl was mixed with 0.1 M BICINE, pH 8.5, 20 % (w/v) PEG 10000 at 1:1 to carry on co-crystallization. |






