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7DLC

The structure of the Arabidopsis thaliana guanosine deaminase in reaction with N1-methylguanosine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
Collection date2020-11-26
DetectorOXFORD ONYX CCD
Wavelength(s)1.54
Spacegroup nameP 61
Unit cell lengths120.102, 120.102, 40.087
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution24.030 - 2.450
R-factor0.1721
Rwork0.170
R-free0.21710
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7dbf
RMSD bond length0.006
RMSD bond angle0.855
Data reduction softwareCrysalisPro
Data scaling softwareCrysalisPro
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]24.0302.580
High resolution limit [Å]2.4502.450
Rmerge0.2400.943
Number of reflections124211793
<I/σ(I)>8.12.3
Completeness [%]99.9100
Redundancy8.38.6
CC(1/2)0.9880.742
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52771.2 M Na-citrate and 0.1 M HEPES (pH 7.5)

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PDB entries from 2024-05-15

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