7DHD
Vibrio vulnificus Wzb
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL19U1 |
| Synchrotron site | SSRF |
| Beamline | BL19U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-11-11 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.9788 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 47.315, 48.741, 117.316 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 58.660 - 1.710 |
| R-factor | 0.2 |
| Rwork | 0.199 |
| R-free | 0.22300 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2wmy |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.020 |
| Data reduction software | XDS (Jan 31, 2020 (BUILT 20200417)) |
| Data scaling software | Aimless (0.5.29) |
| Phasing software | PHASER (2.7.17) |
| Refinement software | BUSTER (2.10.2) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 58.660 | 1.740 |
| High resolution limit [Å] | 1.710 | 1.711 |
| Rmeas | 0.088 | 1.238 |
| Rpim | 0.025 | 0.343 |
| Number of reflections | 29957 | 1506 |
| <I/σ(I)> | 19.2 | 2.3 |
| Completeness [%] | 99.5 | 99.7 |
| Redundancy | 12.6 | 12.9 |
| CC(1/2) | 0.999 | 0.788 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | Free VvWzb crystals were grown in drops containing 1.5 ul of protein solution (14 mg/ml in the buffer 10 mM HEPES pH 7.5, 150 mM NaCl, 1 mM DTT) and 1.5 ul of reservoir solution (100 mM HEPES pH7.5, 200 mM NaCl, 31% (w/v) PEG 3350) |






