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7D1G

Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase GAPDH from Clostridium beijerinckii

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyCCD
Collection date2020-01-09
DetectorADSC QUANTUM 315r
Wavelength(s)0.9789
Spacegroup nameP 62 2 2
Unit cell lengths120.640, 120.640, 122.135
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution42.910 - 1.580
R-factor0.194
Rwork0.193
R-free0.21130
Structure solution methodSAD
RMSD bond length0.008
RMSD bond angle0.920
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.610
High resolution limit [Å]1.5801.580
Number of reflections718982218
<I/σ(I)>34.22
Completeness [%]99.9
Redundancy7.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2870.1 M HEPES sodium pH 8.5 0.2 M Magnesium chloride hexahydrate 30% v/v Polyethylene glycol 400

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