7CVV
Crystal structure of Catechol o-methyl transferase (COMT) from Niastella koreensis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-11-16 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.97934 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 166.185, 93.181, 43.335 |
Unit cell angles | 90.00, 104.12, 90.00 |
Refinement procedure
Resolution | 31.080 - 2.520 |
R-factor | 0.1804 |
Rwork | 0.178 |
R-free | 0.21750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5n5d |
RMSD bond length | 0.007 |
RMSD bond angle | 1.541 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.126 | 0.090 | 0.316 |
Rmeas | 0.138 | 0.097 | 0.359 |
Rpim | 0.055 | 0.038 | 0.167 |
Total number of observations | 113566 | ||
Number of reflections | 21163 | 1089 | 1071 |
<I/σ(I)> | 15.7 | ||
Completeness [%] | 99.0 | 98.3 | 98.2 |
Redundancy | 5.4 | 6.3 | 4.2 |
CC(1/2) | 0.992 | 0.770 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 20% PEG4000, 20% 2-Propanol and 0.1M Sodium citrate pH 5.6 |