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7CV1

Structure of human tRNAHis guanylyltransferase (Thg1) in the presence of human mitochondrial tRNAHis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-1A
Synchrotron sitePhoton Factory
BeamlineBL-1A
Temperature [K]100
Detector technologyPIXEL
Collection date2018-12-17
DetectorDECTRIS EIGER X 4M
Wavelength(s)1.1000
Spacegroup nameP 31 2 1
Unit cell lengths155.878, 155.878, 201.500
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.462 - 4.000
R-factor0.2436
Rwork0.242
R-free0.25540
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ote
Data reduction softwareDIALS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.46249.4604.280
High resolution limit [Å]4.00011.3104.000
Rmerge1.0110.0967.893
Rmeas1.0360.0998.085
Rpim0.2260.0221.742
Total number of observations2271493005
Number of reflections2446811734363
<I/σ(I)>5.921.51.2
Completeness [%]100.098.9100
Redundancy20.419.421.3
CC(1/2)0.9890.9970.547
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1 M Tris-HCl pH 7.0, 10% (w/v) PEG6000, 5% (w/v) Tacsimate pH7.0

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PDB entries from 2024-05-15

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