7CL3
The crystal structure of KanJ in complex with kanamycin B
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
| Synchrotron site | Photon Factory |
| Beamline | AR-NW12A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2019-05-26 |
| Detector | ADSC QUANTUM 270 |
| Wavelength(s) | 1 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 50.289, 184.514, 109.543 |
| Unit cell angles | 90.00, 93.99, 90.00 |
Refinement procedure
| Resolution | 47.060 - 2.200 |
| R-factor | 0.1955 |
| Rwork | 0.194 |
| R-free | 0.21730 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7cl2 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.451 |
| Data reduction software | XDS |
| Data scaling software | SCALA |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.240 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Rmerge | 0.039 | 0.498 |
| Rmeas | 0.054 | 0.677 |
| Rpim | 0.037 | 0.455 |
| Number of reflections | 100173 | 4932 |
| <I/σ(I)> | 15.4 | 2.2 |
| Completeness [%] | 99.6 | 100 |
| Redundancy | 3.4 | 3.5 |
| CC(1/2) | 0.999 | 0.734 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | PEG 4000, Lithium sulfate, Tris |
