7CGV
Full consensus L-threonine 3-dehydrogenase, FcTDH-IIYM (NAD+ bound form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NE3A |
Synchrotron site | Photon Factory |
Beamline | AR-NE3A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-11 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 |
Unit cell lengths | 61.575, 77.513, 76.834 |
Unit cell angles | 71.01, 75.13, 74.88 |
Refinement procedure
Resolution | 36.410 - 2.380 |
R-factor | 0.2145 |
Rwork | 0.212 |
R-free | 0.26260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3wmx |
RMSD bond length | 0.010 |
RMSD bond angle | 1.176 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.410 | 2.470 |
High resolution limit [Å] | 2.380 | 2.380 |
Number of reflections | 48940 | 4236 |
<I/σ(I)> | 11.4 | |
Completeness [%] | 96.2 | |
Redundancy | 3.4 | |
CC(1/2) | 0.985 | 0.985 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 2.5mM NAD+, 12% PEG 3350, 0.1M sodium acetate trihydrate (pH 7.0) |