7C6V
Crystal structure of beta-glycosides-binding protein (W177X) of ABC transporter in a closed state bound to laminaritriose (Form II)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2019-09-17 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 185.410, 185.410, 74.180 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 80.280 - 2.800 |
R-factor | 0.1889 |
Rwork | 0.187 |
R-free | 0.23560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7c63 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.841 |
Data reduction software | MOSFLM (7.2.2) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 80.280 | 80.280 | 3.060 |
High resolution limit [Å] | 2.800 | 9.170 | 2.800 |
Rmerge | 0.108 | 0.039 | 0.438 |
Rmeas | 0.113 | 0.041 | 0.461 |
Rpim | 0.034 | 0.012 | 0.144 |
Total number of observations | 12584 | 47589 | |
Number of reflections | 34597 | 1111 | 4705 |
<I/σ(I)> | 19.1 | 40 | 5.3 |
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 11.1 | 11.3 | 10.1 |
CC(1/2) | 0.999 | 0.999 | 0.954 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 293 | 0.2 M Ammonium sulphate, 40% PEG 8000 |