7C22
Crystal structure of the C-terminal domain of SARS-CoV-2 nucleocapsid protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-05-03 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 1 |
Unit cell lengths | 43.763, 49.458, 68.819 |
Unit cell angles | 106.79, 90.05, 97.79 |
Refinement procedure
Resolution | 19.820 - 2.000 |
R-factor | 0.191 |
Rwork | 0.189 |
R-free | 0.23820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2cjr |
RMSD bond length | 0.007 |
RMSD bond angle | 1.437 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.820 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.107 | 0.639 |
Rpim | 0.065 | 0.391 |
Number of reflections | 35328 | 2636 |
<I/σ(I)> | 5.9 | 1.4 |
Completeness [%] | 95.6 | 96 |
Redundancy | 3.5 | |
CC(1/2) | 0.995 | 0.752 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2M Ammonium acetate, 0.1M Sodium acetate pH 4.6, 30% PEG 4000 |