7BB3
Structure of S. pombe YG-box oligomer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 77 |
Detector technology | PIXEL |
Collection date | 2016-11-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.976251 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 27.190, 83.710, 160.060 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.493 - 2.158 |
R-factor | 0.2586 |
Rwork | 0.257 |
R-free | 0.29190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rg5 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.1_3469) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.493 | 2.235 |
High resolution limit [Å] | 2.158 | 2.158 |
Rmerge | 0.105 | 0.824 |
Rmeas | 0.114 | 0.891 |
Rpim | 0.045 | 0.334 |
Number of reflections | 10282 | 1010 |
<I/σ(I)> | 10.85 | 2.25 |
Completeness [%] | 99.4 | 99.7 |
Redundancy | 6.6 | |
CC(1/2) | 0.998 | 0.708 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.9 | 289.15 | 65 % 2-methylpentanediol, 80 mM KCl, 40 mM HEPES |