7BAY
Crystal structure of CbpF from Streptococcus pneumoniae complexed with a Ytterbium derivative
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALBA BEAMLINE XALOC |
| Synchrotron site | ALBA |
| Beamline | XALOC |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-02-02 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97934 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 114.904, 52.207, 73.990 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.530 - 2.650 |
| R-factor | 0.2028 |
| Rwork | 0.201 |
| R-free | 0.24190 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2v05 |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.396 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.18_3855) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.530 | 2.780 |
| High resolution limit [Å] | 2.650 | 2.650 |
| Rmerge | 0.097 | 0.708 |
| Rpim | 0.035 | 0.262 |
| Number of reflections | 13491 | 1761 |
| <I/σ(I)> | 10.1 | |
| Completeness [%] | 99.8 | |
| Redundancy | 8.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | ammonium sulfate PEG 8000 sodium cacodylate |
