7B9H
Crystal structure of the PDE4D catalytic domain in complex with GEBR-42a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-23 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.748, 98.628, 119.821 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.130 - 1.500 |
R-factor | 0.1956 |
Rwork | 0.194 |
R-free | 0.22060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2pw3 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19rc7_4070) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.130 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Number of reflections | 122986 | 5856 |
<I/σ(I)> | 11.5 | |
Completeness [%] | 99.8 | |
Redundancy | 12.9 | |
CC(1/2) | 0.999 | 0.631 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | PEG 3350, Magnesium Chloride, Hepes |