7AW4
MerTK kinase domain with type 3 inhibitor from a DNA-encoded library
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97950 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.568, 90.490, 69.415 |
Unit cell angles | 90.00, 99.37, 90.00 |
Refinement procedure
Resolution | 39.480 - 1.980 |
R-factor | 0.215 |
Rwork | 0.214 |
R-free | 0.24600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | internal model |
RMSD bond length | 0.008 |
RMSD bond angle | 0.930 |
Data reduction software | DIALS |
Data scaling software | Aimless (0.5.32) |
Phasing software | AMoRE |
Refinement software | BUSTER (2.11.7) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.860 | 49.860 | 2.030 |
High resolution limit [Å] | 1.980 | 8.850 | 1.980 |
Rmerge | 0.154 | 0.056 | 1.235 |
Rmeas | 0.184 | 0.067 | 1.478 |
Rpim | 0.100 | 0.036 | 0.804 |
Total number of observations | 141247 | 1639 | 10252 |
Number of reflections | 42994 | 511 | 3185 |
<I/σ(I)> | 4.6 | 12.2 | 1.1 |
Completeness [%] | 99.9 | 99.6 | 99.9 |
Redundancy | 3.3 | 3.2 | 3.2 |
CC(1/2) | 0.987 | 0.992 | 0.556 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 293 | 0.3 mM protein co-crystallised with 0.5 mM compound (1 % DMSO) in 25 % PEG3350, 0.2 M MgCl2, 0.1 M PCTP pH 7.5 |