7AOL
Structure of SARS-CoV-2 Main Protease bound to Climbazole
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-04-27 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.033 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 112.504, 52.829, 44.663 |
Unit cell angles | 90.00, 102.80, 90.00 |
Refinement procedure
Resolution | 27.430 - 1.470 |
R-factor | 0.1663 |
Rwork | 0.165 |
R-free | 0.19240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ynq |
RMSD bond length | 0.007 |
RMSD bond angle | 0.938 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | REFMAC (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.430 | 1.523 |
High resolution limit [Å] | 1.470 | 1.470 |
Rmerge | 0.878 | |
Rmeas | 1.028 | |
Number of reflections | 43435 | 4314 |
<I/σ(I)> | 14.61 | |
Completeness [%] | 99.7 | |
Redundancy | 3.7 | |
CC(1/2) | 0.999 | 0.623 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 291 | 25% PEG 1500 5% DMSO 0.1 M MIB pH 7.5 |