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7A3T

Crystal structure of dengue 3 virus envelope glycoprotein in complex with the Fab fragment of the broadly neutralizing human antibody EDE1 C8

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]100
Detector technologyPIXEL
Collection date2016-12-06
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.0
Spacegroup nameP 31 2 1
Unit cell lengths110.309, 110.309, 217.337
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.530 - 2.650
R-factor0.2096
Rwork0.207
R-free0.25400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)D_1292109938 and 4UTA
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX (1.17.1_3660)
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.1502.750
High resolution limit [Å]2.6502.650
Rmerge0.320
Number of reflections449494497
<I/σ(I)>5.10.4
Completeness [%]99.595.8
Redundancy11.5
CC(1/2)0.9900.095
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291100 mM Na3 Citrate pH 5.6, 15% w/v PEG 4,000, 200 mM (NH4)2 SO4

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