7A10
LppS with covalent adduct derived from 1g
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-24 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.82656 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.230, 89.806, 67.005 |
Unit cell angles | 90.00, 103.96, 90.00 |
Refinement procedure
Resolution | 39.000 - 1.850 |
R-factor | 0.1887 |
Rwork | 0.187 |
R-free | 0.22390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5lbg |
RMSD bond length | 0.020 |
RMSD bond angle | 1.864 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.440 | 1.890 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.084 | 1.047 |
Rmeas | 0.099 | |
Rpim | 0.053 | 0.847 |
Number of reflections | 42829 | 2066 |
<I/σ(I)> | 11.7 | 1.2 |
Completeness [%] | 96.5 | 75.4 |
Redundancy | 6.5 | 4.4 |
CC(1/2) | 0.999 | 0.548 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.25 | 293 | Well solution: 0.1 M Na-Citrate pH 4.25 / 17.5% PEG 6K The crystals were cryo-protected by dipping them in mother liquor with increased 25% PEG 6K |