6ZYO
Structure of VIM-2 with 2-Mercaptomethyl-thiazolidine D-syn-1b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-05 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.91587 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 103.530, 79.740, 68.040 |
Unit cell angles | 90.00, 130.50, 90.00 |
Refinement procedure
Resolution | 51.757 - 1.450 |
R-factor | 0.1262 |
Rwork | 0.124 |
R-free | 0.16330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4bz3 |
RMSD bond length | 0.009 |
RMSD bond angle | 0.986 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.760 | 1.480 |
High resolution limit [Å] | 1.450 | 1.450 |
Rpim | 0.027 | 0.497 |
Number of reflections | 73396 | 3591 |
<I/σ(I)> | 16.8 | 1.6 |
Completeness [%] | 98.7 | |
Redundancy | 6.8 | |
CC(1/2) | 0.999 | 0.675 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | 0.2 M MAGNESIUM FORMATE, 20 % W/V PEG3350 |