6ZXQ
Adenylosuccinate Synthetase from H. pylori in complex with HDA, GDP, IMO, Mg
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-10 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.033195 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 120.706, 68.362, 68.828 |
Unit cell angles | 90.00, 121.11, 90.00 |
Refinement procedure
Resolution | 48.460 - 1.400 |
R-factor | 0.1521 |
Rwork | 0.151 |
R-free | 0.19270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3r7t |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (v1.17) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.460 | 48.460 | 1.480 |
High resolution limit [Å] | 1.400 | 4.180 | 1.400 |
Rmerge | 0.134 | 0.081 | 1.394 |
Rmeas | 0.145 | 0.088 | 1.513 |
Total number of observations | 616201 | ||
Number of reflections | 93653 | 3656 | 14659 |
<I/σ(I)> | 8.09 | 22.6 | 1.2 |
Completeness [%] | 98.5 | 98.9 | 96 |
Redundancy | 6.58 | 6.425 | 6.526 |
CC(1/2) | 0.994 | 0.990 | 0.392 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289 | Ammonium sulfate, Tris , PEG 3350 |