6ZV9
Terbium(III)-bound de novo TIM barrel-ferredoxin fold fusion dimer with 4-glutamate binding site and tryptophan antenna (TFD-EE N6W)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-01-29 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 43.970, 56.470, 71.280 |
Unit cell angles | 90.00, 101.69, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.850 |
R-factor | 0.1958 |
Rwork | 0.195 |
R-free | 0.22850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Single domain Rosetta models |
RMSD bond length | 0.003 |
RMSD bond angle | 1.179 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.950 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmeas | 0.055 | 0.697 |
Number of reflections | 56427 | 8189 |
<I/σ(I)> | 13.12 | 1.94 |
Completeness [%] | 98.4 | 97.9 |
Redundancy | 3.06 | 2.97 |
CC(1/2) | 0.999 | 0.845 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.1 M HEPES pH 7.5, 20 % PEG 4000, and 10 % iso-propanol, containing Gly3 as an additive |