6ZQ7
Crystal structure of Chaetomium thermophilum Glycerol Kinase in I222 space group
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-04-24 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 88.600, 89.437, 131.285 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.432 - 2.421 |
R-factor | 0.1897 |
Rwork | 0.186 |
R-free | 0.25130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2d4w |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.16) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.432 | 45.432 | 2.570 |
High resolution limit [Å] | 2.420 | 7.180 | 2.420 |
Rmerge | 0.080 | 0.041 | 1.330 |
Rmeas | 0.086 | 0.044 | 1.434 |
Total number of observations | 268223 | ||
Number of reflections | 38252 | 1477 | 6069 |
<I/σ(I)> | 12.02 | 37.73 | 1.12 |
Completeness [%] | 99.5 | 99.1 | 97.9 |
Redundancy | 7.012 | 6.679 | 7.107 |
CC(1/2) | 0.999 | 0.999 | 0.724 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.125-0.3 M CaCl2; 16-19% PEG 3350 |