6ZQ4
Crystal structure of Chaetomium thermophilum Glycerol Kinase in complex with substrate in P1 space group
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-01-29 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 1 |
Unit cell lengths | 61.380, 112.820, 179.540 |
Unit cell angles | 85.77, 90.04, 85.45 |
Refinement procedure
Resolution | 23.010 - 2.020 |
R-factor | 0.2058 |
Rwork | 0.205 |
R-free | 0.23990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2d4w |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 23.010 | 23.010 | 2.070 |
High resolution limit [Å] | 2.020 | 9.020 | 2.020 |
Rmerge | 0.219 | 0.109 | 1.474 |
Rmeas | 0.237 | 0.117 | 1.717 |
Total number of observations | 1906807 | ||
Number of reflections | 307534 | 3484 | 19548 |
<I/σ(I)> | 4.85 | 12.48 | 0.74 |
Completeness [%] | 97.4 | 98.8 | 83.6 |
Redundancy | 6.2 | 6.864 | 3.678 |
CC(1/2) | 0.991 | 0.993 | 0.269 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.125-0.3 M CaCl2; 16-19% PEG 3350 |