6ZCO
Crystal Structure of C-terminal Dimerization Domain of Nucleocapsid Phosphoprotein from SARS-CoV-2, crystal form II
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | I 41 |
Unit cell lengths | 88.203, 88.203, 42.763 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.361 |
R-factor | 0.1517 |
Rwork | 0.149 |
R-free | 0.19620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6yun |
RMSD bond length | 0.016 |
RMSD bond angle | 1.645 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.096 | 44.096 | 1.430 |
High resolution limit [Å] | 1.360 | 4.300 | 1.361 |
Rmerge | 0.018 | 1.093 | |
Rmeas | 0.047 | 0.020 | 1.446 |
Rpim | 0.016 | 0.006 | 0.698 |
Number of reflections | 34588 | 1178 | 4414 |
<I/σ(I)> | 20.2 | 32.6 | 0.7 |
Completeness [%] | 97.8 | 99.9 | 86.6 |
Redundancy | 7.6 | 8.9 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 277 | tba |