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6ZBP

H11-H4 complex with SARS-CoV-2

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2020-04-30
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97623
Spacegroup nameP 31 2 1
Unit cell lengths73.150, 73.150, 131.670
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution57.151 - 1.850
Rwork0.185
R-free0.21690
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6yz5
RMSD bond length0.012
RMSD bond angle1.682
Data reduction softwareXSCALE
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]57.1511.900
High resolution limit [Å]1.8501.850
Rmerge0.0862.050
Rpim0.0280.460
Number of reflections355062585
<I/σ(I)>18.21.7
Completeness [%]99.599.5
Redundancy19.720.9
CC(1/2)1.0000.700
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Crystals were grown at using the sitting drop vapor diffusion method by mixing 0.2 uL of the 18 mg/mL H11-H4 RBD complex with 0.1 uL of the crystallization buffer containing 0.2 M Sodium acetate trihydrate, 0.1 M MES pH 6.0, 20 % w/v PEG 8000. The crystals grew overnight and were flash cooled in a solution containing the mother liquor with 30 % (v/v) ethylene glycol.

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