6Z9H
Escherichia coli D-2-deoxyribose-5-phosphate aldolase - C47V/G204A/S239D mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-22 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9688 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 61.750, 53.870, 80.530 |
Unit cell angles | 90.00, 110.68, 90.00 |
Refinement procedure
Resolution | 38.350 - 1.720 |
R-factor | 0.184 |
Rwork | 0.182 |
R-free | 0.22660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ktn |
RMSD bond length | 0.009 |
RMSD bond angle | 0.944 |
Data reduction software | XDS |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.410 | 1.780 |
High resolution limit [Å] | 1.580 | 1.720 |
Rmerge | 0.087 | 0.462 |
Rmeas | 0.123 | 0.653 |
Number of reflections | 51138 | 5131 |
<I/σ(I)> | 8.5 | 2.1 |
Completeness [%] | 96.9 | |
Redundancy | 1.76 | |
CC(1/2) | 0.983 | 0.503 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | PEG 3350, magnesium formate, BIS-TRIS |