Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6Z8G

Crystal structure of VSG13 soaked in 0.5 M used to phase VSG13 to solve the structure.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-29
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9198
Spacegroup nameC 1 2 1
Unit cell lengths74.148, 68.407, 157.759
Unit cell angles90.00, 92.17, 90.00
Refinement procedure
Resolution52.550 - 1.560
R-factor0.226
Rwork0.226
R-free0.23300
Structure solution methodSAD
Data reduction softwarexia2
Data scaling softwareAimless
Phasing softwareSHELXDE
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]52.5501.620
High resolution limit [Å]1.5601.560
Number of reflections109295109295
<I/σ(I)>18.77
Completeness [%]97.2
Redundancy4
CC(1/2)0.9830.983
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8296.15Purified methylated VSG13 N-terminal domain was concentrated to 2.5 mg/ml in 10mM Tris.Cl pH 8.0. Crystals were grown at 23C by vapour diffusion using hanging drops formed from mixing a 1:1 volume ratio of the protein with an equilibration buffer consisting of 1.8-2.0M (NH4)2SO4, 100mM Tris.Cl pH 8.5.

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon