6Z7C
Variant Surface Glycoprotein VSGsur mutant H122A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-26 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 46.945, 70.919, 130.503 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 65.250 - 1.640 |
R-factor | 0.1885 |
Rwork | 0.187 |
R-free | 0.21580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6z79 |
Data scaling software | xia2 |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 65.310 | 65.380 | 1.500 |
High resolution limit [Å] | 1.470 | 3.990 | 1.470 |
Rmeas | 0.112 | 0.041 | 3.118 |
Rpim | 0.031 | 0.012 | 0.851 |
Total number of observations | 990624 | 51716 | 48830 |
Number of reflections | 75184 | 4066 | 3652 |
<I/σ(I)> | 10.9 | 62.3 | 0.4 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 13.2 | 12.7 | 13.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 19-24 % PEG 400 100 mM TEA/HCl pH=7.5 10 % (v/v) isopropanol |