6YUN
1.45 Angstrom Resolution Crystal Structure of C-terminal Dimerization Domain of Nucleocapsid Phosphoprotein from SARS-CoV-2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-04-24 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.430, 46.856, 131.947 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.150 - 1.440 |
R-factor | 0.1499 |
Rwork | 0.148 |
R-free | 0.18880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2cjr |
RMSD bond length | 0.011 |
RMSD bond angle | 1.103 |
Data reduction software | Aimless |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_3758: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.860 | 1.520 |
High resolution limit [Å] | 1.440 | 1.440 |
Rmerge | 0.034 | |
Number of reflections | 411193 | 44155 |
<I/σ(I)> | 18.4 | |
Completeness [%] | 98.4 | |
Redundancy | 8.5 | |
CC(1/2) | 0.998 | 0.789 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.8 | 277 | 31% PEG 4K 0.2 M Lithium sulfate 50 mM Tris pH 7.8 |