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6YUA

CO-dehydrogenase coupled to the N-terminal domain of the Acetyl-CoA synthase from Clostridium autoethanogenum isolated after tryptic digestion.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2019-12-16
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1.00000
Spacegroup nameP 41 21 2
Unit cell lengths89.333, 89.333, 527.130
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.950 - 3.160
R-factor0.2252
Rwork0.224
R-free0.25200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ytt
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwareMOLREP
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]131.7833.576
High resolution limit [Å]3.1403.140
Rmerge0.2601.492
Rmeas0.2681.524
Rpim0.0610.309
Number of reflections17564977
<I/σ(I)>8.92.5
Completeness [%]84.381.2
Redundancy17.723.6
CC(1/2)0.9990.748
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.6291.15Crystallization was performed in an anoxic chamber (N2/H2, 95:5 %) with anaerobic solutions. Crystals were obtained by initial screening at 291.15 K using the sitting drop method on a 96-well MRC 2 Crystallization Plates in polystyrene (SWISSCI). The crystallization reservoir contained 90 uL of mother liquor, crystallization drop contained a mixture of 0.6 uL protein and 0.6 uL precipitant. The protein concentration was 28.5 mg/mL in 25 mM Tris pH 7.6, 10% (v/v) glycerol and 2 mM dithiothreitol. The best diffracting crystal of CODH bound to the ACS N-terminal domain was obtained by initial screening using the Shotgun (SG1) screen from Molecular dimensions. The crystallization reservoir contained 200 mM Magnesium chloride hexahydrate and 20% (w/v) polyethylene glycol 3350. The crystal was cryoprotected in the same crystallization solution supplemented with 25% ethylene glycol.

220113

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