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6YTT

CO-dehydrogenase/Acetyl-CoA synthase (CODH/ACS) from Clostridium autoethanogenum at 3.0-A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2019-05-26
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)1.74281
Spacegroup nameP 42 21 2
Unit cell lengths298.943, 298.943, 128.895
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.146 - 3.010
R-factor0.1932
Rwork0.192
R-free0.22010
Structure solution methodSAD
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwareAutoSol
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.1503.315
High resolution limit [Å]3.0073.007
Rmerge0.1621.976
Rmeas0.1682.035
Rpim0.0430.485
Number of reflections814094070
<I/σ(I)>14.21.7
Completeness [%]96.578.2
Redundancy1517.5
CC(1/2)0.9980.646
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5291.15All crystallization were performed in anoxic chamber (N2/H2, 95:5 %) with anaerobic solutions. Crystals were obtained by initial screening at 291.15 K using the sitting drop method on a 96-well MRC 2 Crystallization Plates in polystyrene (SWISSCI). The crystallization reservoir contained 90 uL of mother liquor, crystallization drop contained a mixture of 0.6 uL protein and 0.6 uL precipitant. The best diffracting crystal of CaCODH/ACS from heterotrophic growth on fructose was obtained by initial screening using the Wizard 3 & 4 screen from Jena Bioscience. The crystallization reservoir contained 100 mM BIS-TRIS propane, pH 6.5; 200 mM Sodium fluoride and 20% (w/v) Polyethylene glycol 3,350. The initial protein concentration was 16.4 mg/mL.

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PDB entries from 2024-07-10

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