6YTT
CO-dehydrogenase/Acetyl-CoA synthase (CODH/ACS) from Clostridium autoethanogenum at 3.0-A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-26 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.74281 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 298.943, 298.943, 128.895 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.146 - 3.010 |
R-factor | 0.1932 |
Rwork | 0.192 |
R-free | 0.22010 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | AutoSol |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.150 | 3.315 |
High resolution limit [Å] | 3.007 | 3.007 |
Rmerge | 0.162 | 1.976 |
Rmeas | 0.168 | 2.035 |
Rpim | 0.043 | 0.485 |
Number of reflections | 81409 | 4070 |
<I/σ(I)> | 14.2 | 1.7 |
Completeness [%] | 96.5 | 78.2 |
Redundancy | 15 | 17.5 |
CC(1/2) | 0.998 | 0.646 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291.15 | All crystallization were performed in anoxic chamber (N2/H2, 95:5 %) with anaerobic solutions. Crystals were obtained by initial screening at 291.15 K using the sitting drop method on a 96-well MRC 2 Crystallization Plates in polystyrene (SWISSCI). The crystallization reservoir contained 90 uL of mother liquor, crystallization drop contained a mixture of 0.6 uL protein and 0.6 uL precipitant. The best diffracting crystal of CaCODH/ACS from heterotrophic growth on fructose was obtained by initial screening using the Wizard 3 & 4 screen from Jena Bioscience. The crystallization reservoir contained 100 mM BIS-TRIS propane, pH 6.5; 200 mM Sodium fluoride and 20% (w/v) Polyethylene glycol 3,350. The initial protein concentration was 16.4 mg/mL. |