6YS0
Transaldolase variant D211A from T. acidophilum in complex with D-fructose 6-phosphate Schiff-base intermediate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-03 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 148.002, 172.608, 99.309 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 65.142 - 1.700 |
R-factor | 0.1742 |
Rwork | 0.173 |
R-free | 0.19750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3s0c |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 65.142 | 100.000 | 1.800 |
High resolution limit [Å] | 1.700 | 50.000 | 1.700 |
Rmerge | 0.032 | 0.029 | 1.074 |
Rmeas | 0.033 | 0.033 | 1.114 |
Total number of observations | 1885581 | ||
Number of reflections | 137733 | 1 | 21406 |
<I/σ(I)> | 37.09 | 57.47 | 3.21 |
Completeness [%] | 99.0 | 14.3 | 98.5 |
Redundancy | 13.69 | 4 | 14.043 |
CC(1/2) | 1.000 | 0.910 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 188 mM ammonium acetate (pH 4.4), 10% (w/v) PEG 6000, and 25% (v/v) glycerol |