6YNE
GAPDH purified from the supernatant of HEK293F cells: crystal form 2 of 4.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I03 |
| Synchrotron site | Diamond |
| Beamline | I03 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-07-22 |
| Detector | DECTRIS EIGER2 XE 16M |
| Wavelength(s) | 0.97622 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 81.787, 124.652, 79.740 |
| Unit cell angles | 90.00, 117.04, 90.00 |
Refinement procedure
| Resolution | 72.850 - 1.853 |
| R-factor | 0.1911 |
| Rwork | 0.190 |
| R-free | 0.20660 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6ynd |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.050 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | MOLREP |
| Refinement software | BUSTER (2.10.3) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 72.850 | 2.050 |
| High resolution limit [Å] | 1.850 | 1.850 |
| Rmerge | 0.226 | 1.488 |
| Rmeas | 0.245 | 1.618 |
| Number of reflections | 81465 | 4074 |
| <I/σ(I)> | 6.5 | 1.5 |
| Completeness [%] | 67.6 | 12.8 |
| Redundancy | 7 | 6.5 |
| CC(1/2) | 0.991 | 0.456 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | MORPHEUS condition F9: 0.12M MORPHEUS monosaccharides solution , 0.1M MORPHEUS Buffer System 3, 30% v/v MORPHEUS Precipitant Mix 1 |
