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6YMI

Crystal structure of the SAM-SAH riboswitch with AMP.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-02-02
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9119
Spacegroup nameC 1 2 1
Unit cell lengths86.506, 147.359, 74.844
Unit cell angles90.00, 91.36, 90.00
Refinement procedure
Resolution74.590 - 2.500
R-factor0.2151
Rwork0.214
R-free0.24180
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6yl5
RMSD bond length0.003
RMSD bond angle0.797
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]74.8202.540
High resolution limit [Å]2.5002.500
Rmerge0.1110.830
Rpim0.0720.520
Number of reflections575831582
<I/σ(I)>8.3
Completeness [%]99.298.6
Redundancy3.4
CC(1/2)0.9900.550
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP62930.01 M Magnesium Sulfate, 0.05 M Sodium Cacodylate pH 6.0, 1.8 M Lithium Sulfate monohydrate

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