6YM3
Crystal structure of Compound 1 with PIP4K2A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-03-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91841 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 43.934, 98.132, 104.256 |
Unit cell angles | 90.00, 92.96, 90.00 |
Refinement procedure
Resolution | 45.990 - 2.050 |
R-factor | 0.2036 |
Rwork | 0.202 |
R-free | 0.25000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ybx |
RMSD bond length | 0.017 |
RMSD bond angle | 2.142 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.990 | 2.120 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.060 | 0.512 |
Number of reflections | 59573 | 9014 |
<I/σ(I)> | 12.5 | |
Completeness [%] | 99.3 | 99.3 |
Redundancy | 3.68 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | PEG3350, magnesium formate, glycerol |