6YH0
Marasmius oreades agglutinin (MOA) in complex with the truncated PVPRAHS synthetic substrate
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-20 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.972385 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 121.244, 121.244, 99.913 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 51.882 - 1.560 |
Rwork | 0.174 |
R-free | 0.19930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ef2 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.824 |
Data reduction software | XDS (Mar 15, 2019 BUILT=20190315) |
Data scaling software | Aimless (0.7.4) |
Phasing software | REFMAC (5.8.0258) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 105.000 | 1.590 |
High resolution limit [Å] | 1.560 | 1.560 |
Rmerge | 0.048 | 1.000 |
Rmeas | 0.166 | 1.000 |
Rpim | 0.037 | 1.000 |
Number of reflections | 61848 | 3023 |
<I/σ(I)> | 12.3 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 19.6 | 15 |
CC(1/2) | 0.999 | 0.362 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293.15 | 0.1 M Cacodylate pH 6.5, 0.2 M Sodium acetate, 22% PEG 8000, 10 mM CaCl2, 5 mM DTT |