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6YFT

Virus-like particle of Wenzhou levi-like virus 1

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-01-24
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9184
Spacegroup nameP 1
Unit cell lengths277.471, 396.638, 399.868
Unit cell angles69.66, 83.65, 83.49
Refinement procedure
Resolution61.150 - 3.500
R-factor0.2612
Rwork0.261
R-free0.26060
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2ms2
Data scaling softwareSCALA (3.3.22)
Phasing softwareFFT
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]61.15061.1503.690
High resolution limit [Å]3.50011.0703.500
Rmerge0.0381.481
Rmeas0.4340.0542.095
Rpim0.3070.0381.481
Total number of observations3182922
Number of reflections174983154285262319
<I/σ(I)>2.64.40.5
Completeness [%]87.68689.9
Redundancy1.81.81.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.529310 % v/v ethanol, 0.1 M Tris-HCl pH 8.5

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