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6YFR

Virus-like particle of bacteriophage NT-391

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-01-24
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9184
Spacegroup nameP 1
Unit cell lengths161.917, 162.066, 162.976
Unit cell angles71.16, 66.67, 66.83
Refinement procedure
Resolution51.880 - 2.600
R-factor0.3177
Rwork0.318
R-free0.32310
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2ms2
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.22)
Phasing softwareFFT
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]51.88051.8802.740
High resolution limit [Å]2.6008.2202.600
Rmerge0.1051.134
Rmeas0.3000.1301.440
Rpim0.1780.0750.875
Total number of observations6900982916171242
Number of reflections2940011076334643
<I/σ(I)>2.57.20.5
Completeness [%]69.780.656.2
Redundancy2.32.72.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.629334% MPD, 0.1 M sodium nitrate, 0.1M sodium acetate pH 4.6

220113

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