Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6YFH

Virus-like particle of bacteriophage EMS014

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-05-09
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9184
Spacegroup nameC 2 2 21
Unit cell lengths287.110, 492.500, 553.706
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.357 - 3.893
R-factor0.2666
Rwork0.267
R-free0.26990
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2ms2
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareFFT
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.41049.4104.130
High resolution limit [Å]3.89011.4003.890
Rmerge0.8590.1003.144
Rmeas0.9680.1133.578
Total number of observations1622019
Number of reflections3519421434154883
<I/σ(I)>2.2612.340.47
Completeness [%]99.197.596.7
Redundancy4.6094.3634.296
CC(1/2)0.8360.9950.136
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72930.55 M sodium malonate, 0.25% Jeffamine ED-2003, 0.05 M HEPES pH 7.0

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon