6Y9L
Crystal structure of TSWV glycoprotein N ectodomain (sGn)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-01-26 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 165.992, 215.878, 146.368 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.020 - 4.100 |
R-factor | 0.2784 |
Rwork | 0.277 |
R-free | 0.30190 |
Structure solution method | MIRAS |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | AutoSol |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.020 | 49.020 | 4.210 |
High resolution limit [Å] | 4.100 | 18.360 | 4.100 |
Rmerge | 0.104 | 0.047 | 3.877 |
Rmeas | 0.114 | 0.052 | 4.237 |
Total number of observations | 133260 | ||
Number of reflections | 20685 | 252 | 1288 |
<I/σ(I)> | 8.39 | 29.49 | 0.41 |
Completeness [%] | 98.8 | 92.3 | 85.4 |
Redundancy | 6.442 | 5.048 | 5.871 |
CC(1/2) | 0.998 | 0.998 | 0.274 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | 1.8 M ammonium sulfate 0.1 M Tris pH 8.5 |