6Y9C
The structure of a quaternary ammonium Rieske monooxygenase reveals insights into carnitine oxidation by gut microbiota and inter-subunit electron transfer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-30 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9119 |
Spacegroup name | P 63 |
Unit cell lengths | 91.242, 91.242, 87.366 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.230 - 1.800 |
R-factor | 0.2483 |
Rwork | 0.246 |
R-free | 0.29230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3vcp |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.230 | 1.864 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.174 | 1.350 |
Rmeas | 0.182 | 1.442 |
Rpim | 0.051 | 0.499 |
Number of reflections | 38296 | 3808 |
<I/σ(I)> | 4.15 | 0.36 |
Completeness [%] | 94.7 | |
Redundancy | 11.8 | |
CC(1/2) | 0.988 | 0.885 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 | 295 | 10mM HEPES, 20% PEG3350, 0.2M NaSCN, 0.5mM TCEP |