6Y8Y
Structure of Baltic Herring (Clupea Harengus) Phosphoglucomutase 5 (PGM5) with bound Glucose-1-Phosphate
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID29 |
| Synchrotron site | ESRF |
| Beamline | ID29 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-04-10 |
| Detector | DECTRIS PILATUS 6M-F |
| Wavelength(s) | 1.07227 |
| Spacegroup name | P 2 21 21 |
| Unit cell lengths | 47.230, 94.680, 146.970 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.340 - 1.950 |
| R-factor | 0.1703 |
| Rwork | 0.168 |
| R-free | 0.20970 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6y8x |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.622 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.16_3546) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.990 | 2.000 |
| High resolution limit [Å] | 1.950 | 1.950 |
| Rmerge | 0.116 | 0.816 |
| Rmeas | 0.127 | 0.898 |
| Rpim | 0.051 | 0.368 |
| Number of reflections | 48980 | 3394 |
| <I/σ(I)> | 9.2 | 2 |
| Completeness [%] | 99.9 | 99.6 |
| Redundancy | 6.1 | 5.7 |
| CC(1/2) | 0.996 | 0.454 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.12M calcium acetate, 0.08 M sodium cacodylate pH 6.5, 14.0% (v/v) PEG 8000, 20% (v/v) glycerol |






