6Y4V
Crystal structure of p38 in complex with SR68
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-01-27 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 65.779, 74.880, 77.690 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 53.910 - 1.750 |
R-factor | 0.1912 |
Rwork | 0.190 |
R-free | 0.22160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5lar |
RMSD bond length | 0.016 |
RMSD bond angle | 1.643 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 65.779 | 65.779 | 1.840 |
High resolution limit [Å] | 1.750 | 5.530 | 1.750 |
Rmerge | 0.060 | 0.650 | |
Rmeas | 0.077 | 0.066 | 0.716 |
Rpim | 0.032 | 0.028 | 0.296 |
Total number of observations | 233179 | 7724 | 32404 |
Number of reflections | 39442 | 1391 | 5675 |
<I/σ(I)> | 12.8 | 24.8 | 2.6 |
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 5.9 | 5.6 | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 277.15 | 20% PEG Smear Medium, 0.1M MES pH 6.0 |