6Y4J
Engineered Fructosyl Peptide Oxidase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-05 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 90.033, 90.033, 131.435 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.770 - 1.380 |
R-factor | 0.1498 |
Rwork | 0.149 |
R-free | 0.16910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5t1e |
RMSD bond length | 0.017 |
RMSD bond angle | 2.082 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.800 | 1.420 |
High resolution limit [Å] | 1.350 | 1.350 |
Rmerge | 0.071 | 0.407 |
Rmeas | 0.073 | 0.415 |
Rpim | 0.014 | 0.083 |
Number of reflections | 118634 | 17077 |
<I/σ(I)> | 28.8 | 9.9 |
Completeness [%] | 100.0 | |
Redundancy | 20 | |
CC(1/2) | 1.000 | 0.986 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 0.1 M MES monohydrate pH 6.5, 12% PEG 20 K |