6Y2K
Crystal structure of beta-galactosidase from the psychrophilic Marinomonas ef1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-14 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.87313 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 133.332, 133.332, 232.574 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 116.290 - 1.900 |
R-factor | 0.164 |
Rwork | 0.163 |
R-free | 0.18880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1kwg |
RMSD bond length | 0.008 |
RMSD bond angle | 1.249 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 116.290 | 2.000 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.255 | 0.674 |
Number of reflections | 96335 | 3405 |
<I/σ(I)> | 10.9 | |
Completeness [%] | 100.0 | 99.7 |
Redundancy | 29.4 | 33.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 294 | 0.5 M NaCl, 100 mM Na-citrate, 2% ethylene imine polymer. |