6Y28
Crystal structure of HLA-B2705 complexed with the nona-peptide mE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-03-17 |
Detector | MARRESEARCH |
Wavelength(s) | 0.97931 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.031, 83.057, 110.941 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.530 - 1.690 |
R-factor | 0.1872 |
Rwork | 0.185 |
R-free | 0.23630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2a83 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.171 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.000 | 1.780 |
High resolution limit [Å] | 1.680 | 1.680 |
Rmerge | 1.134 | |
Rmeas | 0.148 | |
Number of reflections | 53523 | 7935 |
<I/σ(I)> | 7.5 | 1.5 |
Completeness [%] | 97.8 | 91 |
Redundancy | 3.8 | 3.7 |
CC(1/2) | 0.993 | 0.541 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 20% (w/v) PEG8000, 150 mM NaCl and 100 mM Tris-HCl, pH 7.0 |