6Y0W
Fucosylated antimicrobial linear peptide cFucRH46D in complex with the fucose binding lectin LecB from Pseudomonas aeruginosa at 2.1 Angstrom resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-08-19 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.036790 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 68.999, 68.999, 271.453 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.847 - 2.060 |
R-factor | 0.1778 |
Rwork | 0.175 |
R-free | 0.22190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1oxc |
RMSD bond length | 0.007 |
RMSD bond angle | 0.796 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER |
Refinement software | PHENIX (v.1.11.1-2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.847 | 44.847 | 2.170 |
High resolution limit [Å] | 2.060 | 6.510 | 2.060 |
Rmerge | 0.018 | 0.927 | |
Rmeas | 0.067 | 0.020 | 0.993 |
Rpim | 0.022 | 0.007 | 0.349 |
Total number of observations | 8068 | 27867 | |
Number of reflections | 24853 | 968 | 3493 |
<I/σ(I)> | 22 | 75.6 | 2.4 |
Completeness [%] | 99.9 | 99.6 | 99.2 |
Redundancy | 8.9 | 8.3 | 8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 25% w/v Polyethylene glycol 1,500 |